Top Remote Systems Engineer Jobs in Boston, MA

Implements, configures, deploys, and supports software platforms and HL7 interfaces. Troubleshoots operating systems, databases, VPN connectivity, and application integrations; manages customer support tickets, SLAs, documentation, and implementation timelines. Advises customers on technical requirements, collaborates across teams to improve reliability, and participates in an on-call rotation.

Own and evolve Jira, Aha!, and related product and engineering platforms. Configure workflows, permissions, schemas, dashboards, automations, integrations, and reporting while improving governance, data quality, reliability, and adoption. Partner with Product, Engineering, TPM, Finance, and IT teams to translate business needs into scalable systems. Lead implementations, migrations, platform lifecycle management, troubleshooting, documentation, training, and tooling evaluations.

Supports internal and customer infrastructure platforms through incident triage, systems administration, cloud provisioning, Kubernetes deployments, identity management, monitoring, security hygiene, and runbook execution. The role requires Linux, networking, scripting, Git, cloud, container, and SaaS administration skills, with opportunities to grow into environment builds, configuration changes, compliance work, and platform ownership. It is fully remote, U.S.-based, and supports government-related environments requiring Secret clearance eligibility.

Own the configuration, administration, data quality, routing, integrations, imports, and operational health of Salesforce and HubSpot for revenue teams. Manage lead and account assignment, HubSpot-Salesforce data flows, audits, bulk updates, issue triage, testing, change management, and documentation. Partner with Sales, Marketing, Customer Success, and Support while communicating system changes and resolving platform issues within defined SLAs.

Provide pre-sales technical leadership, solution design, demonstrations, proofs of concept, and deployment support for enterprise wired and wireless networking solutions. Design secure Wi-Fi, switching, routing, cloud-managed, and Zero Trust environments. Support post-sales escalations, channel partners, and customer success while relaying technical feedback to Product Management. Conduct RF planning, deliver technical training, and maintain expertise in enterprise networking trends and competitive products.

Design, build, monitor, and maintain large-scale Linux infrastructure supporting distributed S3-compatible object storage across multi-cloud environments. Responsibilities include kernel and storage optimization, network and hardware troubleshooting, automation with Chef or Ansible, observability, forecasting capacity, technical leadership, project coordination, mentoring, documentation, and on-call support.

Lead and contribute to the design, integration, deployment, and sustainment of mission-focused systems. Translate stakeholder needs into technical requirements, architectures, interface definitions, deployment patterns, and operational processes. Partner with software engineers and data scientists to integrate applications, data pipelines, infrastructure, and external systems. Support testing, verification, troubleshooting, operational readiness, documentation, and reliability improvements for secure, scalable, data-intensive systems.

Designs system architectures, requirements, interfaces, and performance metrics for robotaxi systems spanning autonomy, remote operations, fleet orchestration, mapping, and customer-facing software. Evaluates system performance through data pipelines, simulation, verification, and validation campaigns; collaborates across engineering and operations teams; documents complex workflows; and supports safety-focused autonomous vehicle deployment.

Design, develop, implement, support, and improve financial-system integrations, databases, reporting solutions, and automated processes. Lead technical financial systems projects from requirements gathering through implementation, focusing on Aderant Expert, SQL Server, SSIS, SSRS, and T-SQL. Collaborate with Finance, IS, vendors, and business stakeholders; troubleshoot complex data issues, optimize database performance, document technical solutions, and support multiple concurrent initiatives.

Leads technical pre-sales activities for enterprise storage solutions across SLED accounts in the Northeast. Partners with sales teams, account managers, channel partners, and customers to develop architectures, conduct evaluations and benchmarks, deliver technical presentations, respond to RFPs, and secure technical wins. Provides expertise in storage, networking, cloud-native architectures, Linux, virtualization, containers, and distributed systems while supporting competitive positioning and new business growth.

Lead end-to-end systems engineering for Navy mission planning products, from concept development through deployment and lifecycle support. Responsibilities include requirements, integration and testing, configuration management, engineering change proposals, security compliance, technical documentation, cost and risk analysis, program planning, and stakeholder coordination. The role supports classified systems, CI/CD monitoring, system authorization, deployment, and maintenance while advising leadership and collaborating with military personnel, contractors, and cross-functional engineering teams.

As a Machine Learning Systems Engineer, you will optimize distributed training systems, enhance performance profiling, and develop high-performance GPUs for machine learning workloads.

Lead load and generation interconnection studies, including steady-state, short-circuit, and dynamic analyses. Develop power-flow and stability models, establish study methodologies, evaluate system upgrades and grid-enhancing technologies, and present recommendations to utilities, developers, regulators, and customers. Serve as a power systems subject-matter expert, help connect planning assessments with utility operations, and collaborate with AI and automation teams to improve study efficiency and accuracy.

Lead Salesforce and billing platform engineering with an emphasis on AI-driven automation. Build scalable Salesforce solutions (Apex, Flow, LWC), pilot LLM/agent workflows, modernize CI/CD and test automation, support Quote-to-Cash and billing processes, collaborate across product and finance, drive technical debt reduction, and mentor junior engineers.

Owns Azure DevOps administration, governance, configuration, access controls, boards, organizational structures, and GitHub integrations for Engineering. Diagnoses platform issues, automates administrative tasks, maintains standards and documentation, supports onboarding, tracks platform health and compliance, and contributes to adjacent tools such as LaunchDarkly, Flyway, Cursor, and Claude Code.

Administers and governs engineering platforms including Azure DevOps, LaunchDarkly, Flyway, Cursor, and Claude Code. Manages access controls, feature flags, database migrations, standards documentation, platform health, compliance evidence, and automation. Builds monitoring, enablement resources, and workflow improvements while supporting secure, reliable engineering operations. Senior-level responsibilities also include leading complex integrations, automation strategy, technical mentoring, and AI tooling evaluation.

Build and optimize HubSpot environments across multiple clients, including CRM architecture, data governance, workflows, automations, integrations, APIs, webhooks, migrations, reporting data, and troubleshooting. Audit data quality, resolve integrity issues, establish scalable standards, document systems, and improve CRM reliability and performance within an agency or client-services environment.

Build and operate secure, scalable multi-cloud infrastructure across AWS, GCP, and networking platforms. Develop self-service tooling, infrastructure-as-code defaults, cloud guardrails, and standardized platform patterns. Lead cross-team infrastructure initiatives, technical investigations, and operational improvements while partnering with security, compute, routing, and other infrastructure teams.

Own localization requirements, simulation and track testing, Hardware-in-the-Loop testing, and unit test coverage for autonomous ground vehicle software. Collaborate with autonomy, systems, safety, and hardware teams; review requirements and code; configure localization and safety algorithms; and support systems-level solutions. The role requires source-level C++ understanding, requirements management, safety standards familiarity, and testing across unit, simulation, track, and HIL environments.

Design and develop scalable, highly available software systems for NinjaOne’s IT Operations platform. Build Java and Kotlin applications, implement enterprise design patterns, optimize systems serving millions of endpoints, and contribute production code. Responsibilities include REST service development, relational database work, client-server messaging, caching, scalability improvements, and quality testing. The role collaborates with engineers to deliver reliable cloud services supporting worldwide operations.

Own Salesforce and the broader B2B SaaS go-to-market systems ecosystem, including integrations, workflows, automation, data governance, routing, attribution, and data quality. Build scalable processes across Sales, Marketing, Partnerships, and Customer Success; troubleshoot system issues; manage integration pipelines; evaluate new tools; and translate business needs into technical solutions. The role requires strong Salesforce expertise, API and automation experience, analytical fluency, and independent cross-functional collaboration.

Designs, deploys, and maintains TIC 3.0 and Zero Trust network perimeter defenses, including Palo Alto firewalls, Cloudflare services, F5 load balancing, VPNs, IPS, NAC, and cloud networking across AWS, Azure, and Google Cloud. The role develops secure, highly available architectures, migrates connections to compliant environments, troubleshoots complex network issues, optimizes traffic and load balancing, maintains documentation, and collaborates with technical and business stakeholders.

Design, deploy, maintain, tune, and secure enterprise Linux environments supporting high-performance EDA compute farms. Lead infrastructure-as-code automation, configuration management, continuous deployment, and tooling development using Python, Bash, or Go. Manage LDAP/SSSD naming services, NFS and Autofs storage, virtualization, container infrastructure, registries, networking, and infrastructure telemetry. Support highly available, scalable systems and potentially integrate cloud platforms, CI/CD pipelines, EDA toolchains, and HPC clusters.

Deploys, integrates, operates, and tunes high-performance NFS storage for Kubernetes, GPU, and AI workloads. Responsibilities include CSI integration, Linux and network optimization, storage lifecycle management, air-gapped platform support, infrastructure-as-code, GitOps automation, observability, and troubleshooting distributed storage performance and reliability across hybrid, edge, and bare-metal environments.

Administer, configure, develop, and troubleshoot NetSuite and connected financial systems, including Zone Billing and SuiteProjects Pro. Support month-end close, reconciliations, data integrity, integrations, statutory reporting migration, user access controls, testing, and documentation. Partner with Accounting, FP&A, and IT teams on system enhancements and reporting needs while serving as backup to the Financial Systems Lead and developing toward systems architecture leadership.