Senior Interoperability and Integration Lead

Are you an experienced implementation leader with a passion for building and improving integrated workflow systems? Are you looking for a team that embraces fresh ideas, encourages an agile approach, and ensures your voice is heard and your contributions truly make an impact?
If this sounds like you and you are driven by purpose, join the SOPHiA GENETICS Technical Implementation team as our new Senior Interoperability and Integration Lead, and enable us to make a positive impact on the outcomes for cancer and rare disease patients worldwide.
This is a hybrid opportunity, requiring 3 days onsite at either our corporate offices in Boston, MA.
Our Mission
We believe there is a smarter, more data-driven way to make decisions in healthcare and our cloud-native AI powered SOPHiA DDM Platform makes that vision a reality on a daily basis. You will have direct input to our mission to democratize data-driven medicine for the ultimate benefit of cancer and rare disease patients across the globe.
Your Mission
As the Senior Interoperability and Integration Lead, you will be responsible for the successful implementation of integration projects between the SOPHiA DDM Platform and external systems of the customer base of SOPHiA GENETICS. You will work cross-functionally to ensure smooth execution of projects to set up diagnostic workflows integrating seamlessly with the SOPHiA DDM platform, from initiation to completion. You will operate as a "working manager", combining strong people leadership with hands-on ownership of the most complex and strategic projects, and acting as the primary regional counterpart to Sales and other commercial stakeholders. Alongside Sales colleagues you will be interacting with representatives from prestigious hospitals and clinical labs to understand customer needs and to pitch integrated workflow solutions. You will be translating customer needs into architectural proposals and requirements for internal software engineering teams and oversee implementation, go-live process and post-go-live support period for flawless routine operations.
The value you bring

• Act as customer facing Technical Implementation expert for organizations looking to adopt the SOPHiA DDM platform

• Lead integration projects for connecting SOPHiA DDM to external systems

• Refine and execute systems interoperability architecture and processes for SOPHiA GENETICS

• Act as internal and external expert in integration methodology, process, and requirements

• Act as internal subject area expert for lab workflows & integrations

• Vendor relations & management - manage integration partnership and expectations

• Triage & assist in roadmap planning for SOPHiA DDM platformand features

Requirements

• 5+ years of Project Management experience leading cross-functional implementation projects in a clinical setting
• Strong hands-on experience integrating discrete variant information via HL7 v2/3
• Deep knowledge of data Interoperability standards: HL7 v2/v3, FHIR, SMART on FHIR
• Security & Compliance: Understanding of HIPAA, GDPR, and secure coding standard methodologies
• Clinical Systems: Integration experience with EHRs like Epic, Cerner, and other clinical or LIMS/LIS platforms
• Clear communication skills
• Ability to have efficient project strategy and architecture alignment discussions with stakeholders of varied backgrounds - executives to technical colleagues
• Collaborative
• Fast learner, rapidly building knowledge in a fast-evolving field

Nice to have:

• Software development experience with Python and/or Java
• Cloud: Native development in Azure and/or AWS, including serverless, IAM, and containerized services
• Development & Collaboration Tools: Atlassian suite (JIRA, Confluence), GitHub, GitLab, and familiarity with CI/CD pipelines

Benefits
You will be joining an organisation with the patient at the heart of every decision and action, driven by purpose as we pursue exponential growth.
Business recognition and accolades include:

• World's most innovative companies (Top 10)
• World's smartest companies (Top 50)
• 100 Best Places to Work in Boston
• Top 10 European Tech Startup
• Top 10 European biotechs startup to watch
• Top 25 East-Coast Biotech to watch

Our benefits package is comprehensive, but varies internationally in-line with local standards and laws. You can discuss a full breakdown with us, but as a brief overview:
US:
Outstanding Medical, Dental & Vision with 90% Employer Contribution
Company matched 401K at 4%
Company-paid short & long-term disability insurance
FSA commuter benefits
20 Days PTO, increasing to 25 with tenure; 5 Days Sick and 14 Public Holidays
Free EAP
Our DNA
Like the strands of DNA itself, SOPHiA GENETICS and the team are deeply interconnected and reliant on each other to deliver. There are common threads across the team. Things that bind us together. Those things are Relentless Curious; Resilient & Nimble and Fearlessly Adventurous
Our Virtues
At SOPHiA GENETICS we established our 7 Virtues to clarify how our principles show up each day through action. We Decide; We Do; We Collaborate; We Innovate; We Empower; We Adapt and We Learn.
At the centre of our Virtues is our Mantra, We Care, which provides a constant reminder of the compassionate, benevolent, and hopeful nature of our mission and how it should be threaded through each of our Virtues and everything we do. Learn more about our DNA and Virtues on our Careers portal
The Process
We use the power of AI to help our partners make decisions. If you're utilising AI in your search and application process, why not use some of these prompts, or read our AI guide.
'What impact can I expect to have on the world by working at SOPHiA GENETICS?'
'I have an interview with SOPHiA GENETICS. What should I know before I meet with them?'
'I am a *job title* - What can SOPHiA GENETICS offer my career?'
Apply now with your CV and any supporting information.
Suitably qualified candidates will be invited through an interview and screening process where you will speak with members of our Talent Acquisition Team, the hiring leader alongside key colleagues and stakeholders from across the business. If you need additional support for accessibility, please contact our TA team for assistance.
We appreciate the value external partners can bring, but we operate a direct-hiring model and we are not looking to utilise agency support at this time. All hiring is controlled by Talent Acquisition, potential partners should liaise through TA and not our hiring teams please.
Starting Date: Q1 2026 - Date as discussed
Location: Boston, MA - Hybrid work schedule
Contract: Permanent
MA Pay Range: $88k - $168k
Disclaimer: The estimated pay range represents a good faith estimate of what the Company expects to pay a successful applicant for the listed position and applies specifically to candidates based in Massachusetts. Due to various factors, the estimated pay range may vary in other locations. Should the level or location of the role change during the hiring process, the applicable base range may be updated accordingly. Compensation decisions are dependent on several factors including, but not limited to, an individual's qualifications, job related skills, years of experience, location, relevant education or training, internal equity, and alignment with market data. The range does not include benefits, and if applicable, bonus, commission, or equity.