Takeda Logo

Takeda

Senior Automation Engineer

Posted 10 Hours Ago
Be an Early Applicant
Hybrid
Lexington, MA, USA
137K-215K Annually
Senior level
Hybrid
Lexington, MA, USA
137K-215K Annually
Senior level
Leads the design, implementation, and lifecycle management of automated analytical testing platforms for biologics and synthetic molecules. Develops digital tools, data workflows, databases, and automated methods; partners with scientific and quality teams; manages robotic and software vendors; leads projects and change initiatives; and identifies scalable automation opportunities. The role also supports analytical method development, regulatory alignment, continuous improvement, and data-driven laboratory efficiency.
The summary above was generated by AI

By clicking the “Apply” button, I understand that my employment application process with Takeda will commence and that the information I provide in my application will be processed in line with Takeda’s Privacy Notice and Terms of Use.  I further attest that all information I submit in my employment application is true to the best of my knowledge.

Job Description

About the role:
The Senior Automation Engineer is responsible for leading lab automation and digital capability initiatives that support in-process analytical testing across biologics and synthetic molecule testing to improve organization KPI matrix. In this role, you will help design, implement, and maintain fit-for-purpose, modular, fully automated, end-to-end analytical testing platforms and digital tools that support faster, more reliable laboratory work.
How you will contribute:

  • Lead the design, implementation, and life cycle management of modular and fully automated analytical testing platforms for in-process testing.
  • Implement digital capabilities such as agentic and non-agentic agents, visualization tools, data management platforms, and database solutions to improve business efficiency.
  • Partner with Process Development, Analytical Development, Characterization and Attribute Sciences, Quality, and Stability teams to understand their needs, reduce redundancy, and deliver lab automation solutions.
  • Lead lab automation and digital projects using clear project plans, change management approaches, and practical delivery of methods.
  • Evaluate, onboard, and manage robotic systems, software, and vendor solutions for lab automation.
  • Develop technical strategies, identify gaps and opportunities, and support decisions on automation, digital tools, and analytical method development.
  • Contribute to the value capture from automation and digital work through continuous improvement and scalable solutions.

What you bring to Takeda:

  • Either BSc., MSc., or Ph.D. in Analytical Chemistry, Pharmaceutical Sciences or related fields with lab automation and digital industry experience OR a degree in Information Technology or Computer Science with industry experience in analytical testing and method development environment.
  • Typical 3 years (PhD) or 9 years (MS) or 11 years (BS) of relevant industry experience.
  • Strong expertise in integrated and modular laboratory automation systems, including liquid handlers such as Tecan Evo® and Fluent®, and SCARA robotic modular systems such as Thermo Inspire® and HiRes FlexPod® or FlexCart®.
  • Experience developing automated analytical methods and orchestration workflows using scheduler and control platforms such as Momentum® and Cellario OS®.
  • Expertise in basic programming & coding for statistical and advanced data analytics (Py-thon®, R®); data automation platforms such as Domino® Data Lab and database solutions such as SQL.
  • Proven track record of leading projects and initiatives with minimal supervision.
  • Effective verbal, written, and scientific data presentation skills.
  • Knowledge of analytical testing methods used for in-process testing of biologics and synthetic molecules is desirable.
  • Knowledge of ICH and other regulatory guidance for analytical method development and life cycle management is desirable.
  • Exposure to chromatographic, electrophoretic, and isoelectric focusing methods, including ultra-high-performance liquid chromatography, high-performance liquid chromatography, capillary electrophoresis, CE-SDS, Maurice, LabChip GXII, or enzyme-linked immunosorbent assay methods.

Takeda Compensation and Benefits Summary

We understand compensation is an important factor as you consider the next step in your career. We are committed to equitable pay for all employees, and we strive to be more transparent with our pay practices. 

For Location:

Lexington, MA

U.S. Base Salary Range:

$137,000.00 - $215,270.00

The estimated salary range reflects an anticipated range for this position. The actual base salary offered may depend on a variety of factors, including the qualifications of the individual applicant for the position, years of relevant experience, specific and unique skills, level of education attained, certifications or other professional licenses held, and the location in which the applicant lives and/or from which they will be performing the job. The actual base salary offered will be in accordance with state or local minimum wage requirements for the job location. 


For information about our benefits, please click here.


EEO Statement

Takeda is proud in its commitment to creating a diverse workforce and providing equal employment opportunities to all employees and applicants for employment without regard to race, color, religion, sex, sexual orientation, gender identity, gender expression, parental status, national origin, age, disability, citizenship status, genetic information or characteristics, marital status, status as a Vietnam era veteran, special disabled veteran, or other protected veteran in accordance with applicable federal, state and local laws, and any other characteristic protected by law.

LocationsLexington, MA

Worker TypeEmployee

Worker Sub-TypeRegular

Time TypeFull time

Job Exempt

Yes

It is unlawful in Massachusetts to require or administer a lie detector test as a condition of employment or continued employment. An employer who violates this law shall be subject to criminal penalties and civil liability.
HQ

Takeda Cambridge, Massachusetts, USA Office

Our offices in Massachusetts span across the greater Boston area, including a state of the art research facility in the heart of Kendall Square. Our location enables us to build relationships with cutting-edge companies, leading research hospitals, academic institutions, and more

Takeda Boston, Massachusetts, USA Office

Boston, United States

Takeda Lexington, Massachusetts, USA Office

300 Shire Way, Lexington, MA, United States, 02421

Similar Jobs

10 Hours Ago
Hybrid
Lexington, MA, USA
116K-182K Annually
Senior level
116K-182K Annually
Senior level
Healthtech • Software • Analytics • Biotech • Pharmaceutical • Manufacturing
Leads automation engineering within a regulated biopharmaceutical manufacturing environment. Serves as a subject matter expert for PLC, DCS, MES, and related data systems; troubleshoots operations, ensures compliance, leads automation projects, reviews technical work, drives optimization, supports audits, develops SOPs, and maintains system documentation. Requires strong DeltaV or comparable DCS, PLC programming, validation, commissioning, batch manufacturing, industrial networking, and project leadership experience.
Top Skills: Control Systems NetworkingData HistoriansDcsDeltavEthernet/IpIndustrial Control SystemsInstrumentationIsa-S88Isa-S95MesOpcPlcProfibusScada
19 Hours Ago
In-Office
Boston, MA, USA
Senior level
Senior level
Information Technology • Consulting
Leads the design, development, and delivery of scalable automation solutions for laboratory and scientific workflows. Responsibilities include software architecture, Python and AWS development, APIs, microservices, data pipelines, system integrations, workflow orchestration, testing, CI/CD, production support, and regulatory compliance. The role mentors engineers, establishes reusable frameworks, manages technical delivery and dependencies, and serves as a client-facing technical lead across distributed teams.
Top Skills: 21 Cfr Part 11Amazon AuroraAmazon Ec2Amazon RdsAmazon S3Apache AirflowAWSAws CloudwatchAws IamAws LambdaAws Step FunctionsBenchlingCdsCi/CdConfluenceDockerElnFastapiGitGxpJIRALimsMicroservicesNosql DatabasesNumpyPandasPrefectPytestPythonPyTorchRelational DatabasesRest ApisScikit-LearnSdmsSQLTensorFlowUnittest
3 Days Ago
In-Office
122K-195K Annually
Senior level
122K-195K Annually
Senior level
Healthtech • Biotech
Lead the design, integration, testing, deployment, and sustainment of automated cell-based bioassay and sample-preparation workflows. Convert early prototypes into scalable, GMP-ready systems while ensuring data integrity, traceability, reproducibility, and assay integrity. Collaborate with scientists, quality, engineering, digital, and operations teams; troubleshoot biological, liquid-handling, and integration issues; support validation, lifecycle management, standardization, and continuous improvement across automation platforms.
Top Skills: CentrifugesChange ControlCobot ArmsDecappersDispensersGlpGmpHamilton StarHamilton VantageHighres CellarioIq/Oq/Pq ValidationLaboratory Automation HardwareLaboratory Automation SoftwareLifecycle ManagementLiquid HandlersPeelersSealersThermo Crs Momentum

What you need to know about the Boston Tech Scene

Boston is a powerhouse for technology innovation thanks to world-class research universities like MIT and Harvard and a robust pipeline of venture capital investment. Host to the first telephone call and one of the first general-purpose computers ever put into use, Boston is now a hub for biotechnology, robotics and artificial intelligence — though it’s also home to several B2B software giants. So it’s no surprise that the city consistently ranks among the greatest startup ecosystems in the world.

Key Facts About Boston Tech

  • Number of Tech Workers: 269,000; 9.4% of overall workforce (2024 CompTIA survey)
  • Major Tech Employers: Thermo Fisher Scientific, Toast, Klaviyo, HubSpot, DraftKings
  • Key Industries: Artificial intelligence, biotechnology, robotics, software, aerospace
  • Funding Landscape: $15.7 billion in venture capital funding in 2024 (Pitchbook)
  • Notable Investors: Summit Partners, Volition Capital, Bain Capital Ventures, MassVentures, Highland Capital Partners
  • Research Centers and Universities: MIT, Harvard University, Boston College, Tufts University, Boston University, Northeastern University, Smithsonian Astrophysical Observatory, National Bureau of Economic Research, Broad Institute, Lowell Center for Space Science & Technology, National Emerging Infectious Diseases Laboratories

Sign up now Access later

Create Free Account

Please log in or sign up to report this job.

Create Free Account